Search Results for: datasets

New & Improved NCBI Datasets Genome and Assembly Pages 

New & Improved NCBI Datasets Genome and Assembly Pages 

Legacy pages now redirect  Effective July 10, 2023, NCBI’s Assembly and Genome record pages now redirect to new NCBI Datasets pages. As previously announced, these updates are part of our ongoing effort to modernize and improve your user experience. NCBI Datasets is a new resource that makes it easier to find and download genome data.    The following pages have … Continue reading New & Improved NCBI Datasets Genome and Assembly Pages 

Download Assembled Genome Data Programmatically with NCBI Datasets

Download Assembled Genome Data Programmatically with NCBI Datasets

As previously announced, NCBI’s Assembly and Genome record pages will be redirected to new NCBI Datasets pages in June 2023. The NCBI Datasets Command Line Interface (CLI) tools provide easy, straightforward programmatic downloads of assembled genome sequence data. We invite you to check them out and let us know what you think!  Features & Benefits of NCBI … Continue reading Download Assembled Genome Data Programmatically with NCBI Datasets

Now Available! Compare NCBI RefSeq and UniProt Datasets

Now Available! Compare NCBI RefSeq and UniProt Datasets

Do you need to compare and combine data based on NCBI RefSeq and UniProt datasets, and aren’t sure which proteins are comparable? For many years, NCBI Gene has provided information about the relationships between RefSeq and UniProt accessions courtesy of data imported from UniProt, but the tremendous growth of both datasets has led to large … Continue reading Now Available! Compare NCBI RefSeq and UniProt Datasets

NCBI Datasets: Easily Access and Download Sequence Data and Metadata

NCBI Datasets: Easily Access and Download Sequence Data and Metadata

Effective May 2024, NCBI Datasets will replace legacy Genome and Assembly web resources  As part of our ongoing effort to enhance your experience and modernize our services, NCBI will gradually replace the legacy Genome and Assembly resources with the newly introduced NCBI Datasets resource. NCBI Datasets is a continually evolving platform designed to provide easy and intuitive … Continue reading NCBI Datasets: Easily Access and Download Sequence Data and Metadata

New & Improved NCBI Datasets Genome and Assembly Pages

New & Improved NCBI Datasets Genome and Assembly Pages

Legacy pages will be redirected effective July 2023 In July 2023, NCBI’s Assembly and Genome record pages will be redirected to new Datasets pages as part of our ongoing effort to modernize and improve your user experience. NCBI Datasets is a new resource that makes it easier to find and download genome data.   We will … Continue reading New & Improved NCBI Datasets Genome and Assembly Pages

Introducing the New NCBI Datasets Genome Annotation Table

Introducing the New NCBI Datasets Genome Annotation Table

As part of our ongoing effort to modernize and improve your experience, we are excited to introduce the new NCBI Datasets genome annotation table. You can now quickly and easily access annotated gene and protein sequences annotated by NCBI RefSeq or GenBank submitters.   Features & Benefits Easier than ever to search and download data for … Continue reading Introducing the New NCBI Datasets Genome Annotation Table

Now Available! Updated NCBI Datasets Command-Line Tools 

Now Available! Updated NCBI Datasets Command-Line Tools 

NLM’s NCBI Datasets announces the release of version 14 of our command-line (CLI) tools, datasets, and dataformat. This release (CLI v14.0.0) contains many improvements that are inspired by your feedback. It’s now easier than ever to browse and format metadata, generate customized tables, and download data packages. We hope these updates will improve your experience!  … Continue reading Now Available! Updated NCBI Datasets Command-Line Tools 

Introducing NLM’s new NCBI Datasets genome page!

Introducing NLM’s new NCBI Datasets genome page!

As part of an ongoing effort to modernize and improve your experience, NLM’s NCBI Datasets is introducing all-new genome pages. These pages make it easier for you to browse and download genome sequence and metadata, and navigate to tools such as the Genome Data Viewer (GDV) and BLAST. To get started, search NCBI Datasets by … Continue reading Introducing NLM’s new NCBI Datasets genome page!

Announcing the NCBI Datasets SARS-CoV-2 taxonomy page

Announcing the NCBI Datasets SARS-CoV-2 taxonomy page

Need SARS-CoV-2 assembled genome sequences or specific SARS-CoV-2 protein sequences? You can find them on the new SARS-CoV-2 taxonomy page brought to you by NCBI Datasets. The NCBI Datasets SARS-CoV-2 taxonomy page brings you both SARS-CoV-2 genomes and proteins, basic information about SARS-CoV-2, and connections to related NCBI pages, all in one place (see Figures … Continue reading Announcing the NCBI Datasets SARS-CoV-2 taxonomy page