In June, the NCBI Eukaryotic Genome Annotation Pipeline released new annotations in RefSeq for the following organisms, including Danio rerio (zebrafish):
Zebrafish (Danio rerio), 11 other organisms in June RefSeq genome annotations
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Tag Archives: Genome Data Viewer
RefSeq Functional Elements now public
NCBI is pleased to announce the initial data release of RefSeq Functional Elements, a resource that provides RefSeq and Gene records for experimentally validated human and mouse non-genic functional elements. Data can be accessed via Gene, Nucleotide, BLAST, BioProject, Graphical Displays and FTP.
New pig (Sus scrofa) genome annotation in RefSeq
The new pig (Sus scrofa) genome annotation produced by the NCBI eukaryotic genome annotation pipeline is now available in RefSeq. This data is now available for download and can be explored in the Genome Data Viewer, with BLAST, and in the Gene database.
May 10th NCBI Minute: How to Locate and Use Human Genomes and Annotations from NCBI
Next week, NCBI staff will show you how to quickly find and download human genome annotations from both the web and the command line for incorporation into your workflows. We will also show you how to convert the accessions in these files to those used in other bioinformatics databases, as well as how to visualize these annotations on our Genome Data Viewer.
Date and time: Wednesday, May 10, 2017 12:00 PM – 12:30 PM EDT
After registering, you will receive a confirmation email with information about attending the webinar.
After the live presentation, the webinar will be uploaded to the NCBI YouTube channel. Any related materials will be accessible from the Webinars and Courses page; you can also learn about future webinars there.
New Genome Data Viewer access page
NCBI is pleased to offer a direct entry point to the NCBI Genome Data Viewer (GDV) that supports the exploration, visualization and analysis of eukaryotic RefSeq genome assemblies.
The new GDV homepage includes an interactive interface for a quick overview of supported organisms, specific genome searches plus inter-connectivity to Assembly and RefSeq annotation resources. About 100 genome assemblies are now ready for GDV exploration with more on the way. Stay tuned!
