BLAST+ database improved


We’ve made some recent enhancements to the BLAST+ applications that allow you to:

  1. Limit your search by taxonomy using information built into the BLAST databases
  2. Search sequences by accession faster
  3. Use blastdbcmd to retrieve sequences by taxonomy from a BLAST database

The new version of the BLAST databases (version 5, release notes) supports the items listed above. You can access the new executables on FTP. Sample version 5 databases are also available.

Note: This is an alpha release to allow users to test and comment on new features.

Problems/Feedback

Please send problem reports and feedback to blast-help@ncbi.nlm.nih.gov or write to the Help Desk.

One thought on “BLAST+ database improved

  1. Pingback: BLAST+ database improved – Science

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